Protein Alignment CG30178 and Prickle2

DIOPT Version :10

• Sequence 1: NP_726395.1
• Gene: CG30178 / 246501
• FlyBaseID: FBgn0050178
• Length: 187
• Species: Drosophila melanogaster
• Sequence 2: XP_038963548.1
• Gene: Prickle2 / 312563
• RGDID: 1306723
• Length: 939
• Species: Rattus norvegicus
• Alignment Length: 186
• Identity: 52/186 - (27%)
• Similarity: 78/186 - (41%)
• Gaps: 12/186 - (6%)

  Fly     1 MSASICCRCNEKIWPRAVCSL------GKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLD 59
            |:.:||.:|..:|....:...      |..:||..|.|..|..::...::|..|..:.|...:.:
  Rat   217 MTGAICEQCGGQIKGGDIAVFASRAGHGICWHPPCFICTVCNELLVDLIYFYQDGKIYCGRHHAE 281

  Fly    60 KHAARCSACRTPILERGVAAAE-RKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSR 123
            ....||:||...|.......|| |.||.:.|.|..|...|....:....|..:|...|..|::..
  Rat   282 CLKPRCAACDEIIFADECTEAEGRHWHMRHFCCFECETVLGGQRYIMKEGRPYCCHCFESLYAEY 346

  Fly   124 CAGCEK--PIDRRAVVALSTKWHA--KCFKCHHCRKRISAREFWIENGQPICA-AC 174
            |..|.:  .||:..:......|||  .||.|.||:|.:..|.|..:.||..|: ||
  Rat   347 CDTCAQHIGIDQGQMTYDGQHWHATENCFCCAHCKKSLLGRPFLPKQGQIFCSRAC 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG30178	NP_726395.1	LIM	6..61	CDD:413332	12/60 (20%)
		LIM	65..116	CDD:259829	15/51 (29%)
		LIM	124..171	CDD:413332	17/50 (34%)
Prickle2	XP_038963548.1	PET_Prickle	118..214	CDD:193602
		LIM1_Prickle	222..280	CDD:188799	12/57 (21%)
		LIM2_Prickle	285..340	CDD:188802	16/54 (30%)
		LIM3_Prickle	345..403	CDD:188804	20/58 (34%)