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Protein Alignment CG30178 and Pdlim2
DIOPT Version :10
| Sequence 1: | NP_726395.1 |
Gene: | CG30178 / 246501 |
FlyBaseID: | FBgn0050178 |
Length: | 187 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_063130209.1 |
Gene: | Pdlim2 / 290354 |
RGDID: | 1359203 |
Length: | 386 |
Species: | Rattus norvegicus |
| Alignment Length: | 58 |
Identity: | 17/58 - (29%) |
| Similarity: | 26/58 - (44%) |
Gaps: | 1/58 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 65 CSACRTPILERGVAAAERKW-HEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFS 121
|..|...|..:.|...|.:: |..|:.|..|..:|.....|.|...|:|:.|.|:.:|
Rat 320 CEKCSVNISNQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGNELYCEKHARQRYS 377
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG30178 | NP_726395.1 |
LIM |
6..61 |
CDD:413332 |
|
| LIM |
65..116 |
CDD:259829 |
14/51 (27%) |
| LIM |
124..171 |
CDD:413332 |
|
| Pdlim2 | XP_063130209.1 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
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