DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and FHL3

DIOPT Version :9

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_004459.2 Gene:FHL3 / 2275 HGNCID:3704 Length:280 Species:Homo sapiens


Alignment Length:191 Identity:54/191 - (28%)
Similarity:79/191 - (41%) Gaps:22/191 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASICCRCNEKIWP--RAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARC 65
            :|.|..|.|.:.|  |.:...|:|:|.|.|.|..|...:..:.|........|..||.:|.|.||
Human    98 SSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRC 162

  Fly    66 SACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKP 130
            :.|...:.:.||...::.||.:|..|..|...|....|...:...:|.|.|.|||:.:|:.|::|
Human   163 ARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFAPKCSSCKRP 227

  Fly   131 I------------DRRAVVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAACQTVVP 179
            |            ||.        ||..||.|..|...:..:.|..:..|.:|..|....|
Human   228 IVGLGGGKYVSFEDRH--------WHHNCFSCARCSTSLVGQGFVPDGDQVLCQGCSQAGP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:295319 16/56 (29%)
LIM 65..116 CDD:259829 13/50 (26%)
LIM 124..171 CDD:295319 14/58 (24%)
FHL3NP_004459.2 LIM <5..33 CDD:295319
LIM1_FHL3 36..94 CDD:188807
LIM2_FHL3 98..155 CDD:188811 16/56 (29%)
LIM3_FHL 162..213 CDD:188732 13/50 (26%)
LIM4_FHL3 221..276 CDD:188818 15/62 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I4662
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
54.920

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