DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and FHL3

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_004459.2 Gene:FHL3 / 2275 HGNCID:3704 Length:280 Species:Homo sapiens


Alignment Length:191 Identity:54/191 - (28%)
Similarity:79/191 - (41%) Gaps:22/191 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASICCRCNEKIWP--RAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARC 65
            :|.|..|.|.:.|  |.:...|:|:|.|.|.|..|...:..:.|........|..||.:|.|.||
Human    98 SSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRC 162

  Fly    66 SACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKP 130
            :.|...:.:.||...::.||.:|..|..|...|....|...:...:|.|.|.|||:.:|:.|::|
Human   163 ARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFAPKCSSCKRP 227

  Fly   131 I------------DRRAVVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAACQTVVP 179
            |            ||.        ||..||.|..|...:..:.|..:..|.:|..|....|
Human   228 IVGLGGGKYVSFEDRH--------WHHNCFSCARCSTSLVGQGFVPDGDQVLCQGCSQAGP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 16/56 (29%)
LIM 65..116 CDD:259829 13/50 (26%)
LIM 124..171 CDD:413332 14/58 (24%)
FHL3NP_004459.2 LIM <5..33 CDD:413332
LIM1_FHL3 36..94 CDD:188807
LIM2_FHL3 98..155 CDD:188811 16/56 (29%)
LIM3_FHL 162..213 CDD:188732 13/50 (26%)
LIM4_FHL3 221..276 CDD:188818 15/62 (24%)
Blue background indicates that the domain is not in the aligned region.

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