DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and C26C6.6

DIOPT Version :9

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_492106.1 Gene:C26C6.6 / 182934 WormBaseID:WBGene00007740 Length:136 Species:Caenorhabditis elegans


Alignment Length:115 Identity:32/115 - (27%)
Similarity:50/115 - (43%) Gaps:9/115 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CCRCNEKIWP------RAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVV---CSECYLDKH 61
            |..|..||..      :.|..|.:.:|..|..|..|.|.:....:|....|.:   |..|::..:
 Worm     8 CAGCKAKIAEEDVEKNKVVFFLNRMWHRDHIQCIFCKLQISDNRYFRSSIDPMKPSCYACHIQTN 72

  Fly    62 AARCSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLF 111
            ...|:.|..|::|||:.|..|.:|..||||..|:|::.....|.....:|
 Worm    73 HPSCTGCSLPVIERGLVAFNRLFHIDCFRCAICNKTIPQRKGFYERDMMF 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:295319 15/63 (24%)
LIM 65..116 CDD:259829 17/47 (36%)
LIM 124..171 CDD:295319
C26C6.6NP_492106.1 LIM 8..65 CDD:295319 13/56 (23%)
LIM 76..128 CDD:295319 17/47 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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