DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and pxl-1

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001021185.2 Gene:pxl-1 / 175831 WormBaseID:WBGene00016197 Length:413 Species:Caenorhabditis elegans


Alignment Length:166 Identity:59/166 - (35%)
Similarity:86/166 - (51%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CCRCNEKIWPRAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARCSACRT 70
            |..|.:.|..:.|.:|||.:||.|:||.|||..:..:.||..:....|.|.|.::.:.:|..|..
 Worm   176 CAACGKPIIGQVVIALGKMWHPEHYTCCECGAELGQRPFFERNGRAFCEEDYHNQFSPKCQGCHR 240

  Fly    71 PILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKPIDRRA 135
            .|.:|.|:...:.:|.:||.|..|::......|.|.||..:||..|..||:.:|.||.:||....
 Worm   241 AITDRCVSVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFRLFAPKCNGCSQPITSNF 305

  Fly   136 VVALSTKWHAKCFKCHHCRKRISAREFWIENGQPIC 171
            :.||.|.||..||.|.||....:...|:..||.|:|
 Worm   306 ITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLC 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 20/54 (37%)
LIM 65..116 CDD:259829 16/50 (32%)
LIM 124..171 CDD:413332 19/46 (41%)
pxl-1NP_001021185.2 LIM1_Leupaxin 174..228 CDD:188790 19/51 (37%)
LIM 235..290 CDD:395333 17/54 (31%)
LIM3_Paxillin_like 294..346 CDD:188724 20/48 (42%)
LIM4_Paxillin_like 353..404 CDD:188725
Blue background indicates that the domain is not in the aligned region.

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