DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and Ajuba

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_034720.2 Gene:Ajuba / 16475 MGIID:1341886 Length:547 Species:Mus musculus


Alignment Length:200 Identity:58/200 - (28%)
Similarity:99/200 - (49%) Gaps:24/200 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CCRCNEKIWPRA-VC-SLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYL----DKHAAR 64
            |.:||:.|:.:: .| :|...||...|.|..||..:..|.|::|:..|.|.|.||    .:.|.:
Mouse   347 CIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLFSGFQEAAEK 411

  Fly    65 CSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASF-FEVNGYLFCKAHFRELFSSRCAGCE 128
            |..|...|||:.:.|..:.:|..||||:.|:|.|....| .:.:..::|...:.:.::.:||.|.
Mouse   412 CCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGVPFTVDFSNQVYCVTDYHKNYAPKCAACG 476

  Fly   129 KPI-------DRRAVVALSTKWHAKCFKCHHCRKRISARE----FWIENGQPICAACQTVVPSPR 182
            :||       |...|:::...:|.:|:.|..||.::|..|    |.:: |..:|..|..     :
Mouse   477 QPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLD-GHLLCHGCHM-----Q 535

  Fly   183 NLSAQ 187
            .|||:
Mouse   536 RLSAR 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 20/60 (33%)
LIM 65..116 CDD:259829 16/51 (31%)
LIM 124..171 CDD:413332 16/57 (28%)
AjubaNP_034720.2 PreLIM 1..344
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..182
PHA03264 <26..111 CDD:223029
Nuclear localization signal. /evidence=ECO:0000255 289..297
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..332
LIM1_Ajuba_like 347..400 CDD:188738 18/52 (35%)
LIM2_Ajuba_like 412..464 CDD:188741 16/51 (31%)
LIM3_Ajuba_like 472..533 CDD:188822 17/61 (28%)
Blue background indicates that the domain is not in the aligned region.

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