DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and Synpo2

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_536699.2 Gene:Synpo2 / 118449 MGIID:2153070 Length:1257 Species:Mus musculus


Alignment Length:58 Identity:16/58 - (27%)
Similarity:23/58 - (39%) Gaps:5/58 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 KHAARCSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFR 117
            ||.||.:.     |.|..:.:|::..|...:|.|.:..|..|......|.|..|...|
Mouse   340 KHRARHAR-----LRRSESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRR 392

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity