DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and Prickle1

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001028389.1 Gene:Prickle1 / 106042 MGIID:1916034 Length:832 Species:Mus musculus


Alignment Length:156 Identity:45/156 - (28%)
Similarity:64/156 - (41%) Gaps:5/156 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARCSACRTPILERGVAAAE-RKWH 85
            |..:||..|.|..|..::...::|..|..:.|...:.:....|||||...|.......|| |.||
Mouse   148 GVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHA
ELLKPRCSACDEIIFADECTEAEGRHWH 212

  Fly    86 EKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKPI--DRRAVVALSTKWHA--K 146
            .|.|.|:.|...|....:...:|..||...|..|::..|..|.:.|  |...:......|||  .
Mouse   213 MKHFCCLECETVLGGQRYIMKDGRPFCCGCFE
SLYAEYCETCGEHIGVDHAQMTYDGQHWHATEA 277

  Fly   147 CFKCHHCRKRISAREFWIENGQPICA 172
            ||.|..|:..:....|..:.||..|:
Mouse   278 CFSCAQCKASLLGCPFLPKQGQIYCS 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 9/38 (24%)
LIM 65..116 CDD:259829 18/51 (35%)
LIM 124..171 CDD:413332 14/50 (28%)
Prickle1NP_001028389.1 PET_Prickle 22..118 CDD:193602
LIM1_Prickle_1 126..184 CDD:188867 9/35 (26%)
LIM2_Prickle 189..244 CDD:188802 19/54 (35%)
LIM3_Prickle 249..307 CDD:188804 15/55 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..342
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 663..688
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 765..832
Blue background indicates that the domain is not in the aligned region.

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