DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30178 and pxn

DIOPT Version :10

Sequence 1:NP_726395.1 Gene:CG30178 / 246501 FlyBaseID:FBgn0050178 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_031752049.1 Gene:pxn / 100216044 XenbaseID:XB-GENE-941407 Length:1070 Species:Xenopus tropicalis


Alignment Length:169 Identity:61/169 - (36%)
Similarity:89/169 - (52%) Gaps:0/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CCRCNEKIWPRAVCSLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLDKHAARCSACRT 70
            |..||..|..:.|.:|.:|:||.||.|.:||....|:.|...|....|.:.|.|..|.:|..|..
 Frog   896 CFYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHERDGKAYCRKDYFDMFAPKCGGCTH 960

  Fly    71 PILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSSRCAGCEKPIDRRA 135
            .|||..::|....||.:||.|..|....::.||||.:|..:|:.|:.|...|.|:||:|||..|.
 Frog   961 AILENYISALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEMHYHERRGSLCSGCQKPITGRC 1025

  Fly   136 VVALSTKWHAKCFKCHHCRKRISAREFWIENGQPICAAC 174
            :.|:..|:|.:.|.|..|.|:::...|..:|.:|.|..|
 Frog  1026 ITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNC 1064

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30178NP_726395.1 LIM 6..61 CDD:413332 20/54 (37%)
LIM 65..116 CDD:259829 18/50 (36%)
LIM 124..171 CDD:413332 17/46 (37%)
pxnXP_031752049.1 Paxillin 45..234 CDD:460962
LIM1_Paxillin_like 837..889 CDD:259830
LIM2_Paxillin 896..947 CDD:188791 18/50 (36%)
LIM3_Paxillin_like 955..1007 CDD:188724 19/51 (37%)
LIM4_Paxillin 1014..1065 CDD:188795 19/51 (37%)
Blue background indicates that the domain is not in the aligned region.

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