DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30177 and HVA22D

DIOPT Version :10

Sequence 1:NP_726366.1 Gene:CG30177 / 246500 FlyBaseID:FBgn0050177 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_567713.1 Gene:HVA22D / 828598 AraportID:AT4G24960 Length:135 Species:Arabidopsis thaliana


Alignment Length:165 Identity:35/165 - (21%)
Similarity:60/165 - (36%) Gaps:54/165 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLPGWSSLRAIGHDQRHFIELWLKYWVIYALLQGLGVLTDFLLGGLSFYAGLKLILSVGLWFSAP 76
            |.|.::|:.|:....:...|.||.||:||:.|.    ||:.:|        ..||..:.:|::..
plant    22 LYPLYASVIAMESTTKVDDEQWLAYWIIYSFLS----LTELIL--------QSLIEWIPIWYTVK 74

  Fly    77 YSTNHLFNLLNTYSMGKLCPVVEKGVRWHEKVCRNIFR--GFMKSPLVTVVMPRDEDEHITEPRI 139
            .          .:....:.|..:.....:.:|.|..|:  |.::|   |...|       |:|.|
plant    75 L----------VFVAWLVLPQFQGAAFIYNRVVREQFKKHGVLRS---THSKP-------TKPNI 119

  Fly   140 NNRLLKRELSNLMTQIAKNSADHRHQHESPMMIHS 174
            .:.:.                .||..||:    ||
plant   120 LHSIF----------------PHREGHEA----HS 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30177NP_726366.1 TB2_DP1_HVA22 14..>73 CDD:460820 16/58 (28%)
HVA22DNP_567713.1 TB2_DP1_HVA22 24..98 CDD:460820 19/95 (20%)

Return to query results.
Submit another query.