DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr60D and Lcp2

DIOPT Version :10

Sequence 1:NP_726468.1 Gene:Cpr60D / 246492 FlyBaseID:FBgn0050163 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:94 Identity:29/94 - (30%)
Similarity:46/94 - (48%) Gaps:8/94 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKYSLIFALFVV---LASCS-EEDLQAQLLKSENRQNLDGAGQFQHEITVSNGIQVKAQGNVNG 61
            |.|:.:|.|:..|   ||..| .:|:.|.:|...:....||   |...:..||||:..|.|:.:|
  Fly     1 MFKFVMILAVVGVATALAPVSRSDDVHADVLSRSDDVRADG---FDSSLHTSNGIEQAASGDAHG 62

  Fly    62 -IQGEYFLPGEDGKQIRVTYTADATGFHP 89
             |.|.:.....:|:.:.|.|.|:..|:.|
  Fly    63 NIHGNFGWISPEGEHVEVKYVANENGYQP 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr60DNP_726468.1 Chitin_bind_4 41..87 CDD:459790 14/46 (30%)
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 14/46 (30%)

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