DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30160 and tspan5

DIOPT Version :10

Sequence 1:NP_724526.1 Gene:CG30160 / 246490 FlyBaseID:FBgn0050160 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001072198.1 Gene:tspan5 / 779644 XenbaseID:XB-GENE-868310 Length:268 Species:Xenopus tropicalis


Alignment Length:262 Identity:63/262 - (24%)
Similarity:100/262 - (38%) Gaps:67/262 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLNLVFVAGGILLIVVG------SIMLSTMGNFTAFDGGVNTQTIPICI-IVIGS 61
            :|...||.::..|::|...||..:.||      ..:||.:.:.|.. ||.:    |:.: :|:|.
 Frog    11 VSCCIKYFIFGFNVIFWLLGITFLGVGLWAWSEKGVLSNISSITDL-GGFD----PVWLFLVVGG 70

  Fly    62 VTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENN 126
            |.|::.|.||.|.:|||......:::.:.|:|.|:|...:..|...|.....:...:      ||
 Frog    71 VMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLQFFI------NN 129

  Fly   127 AAQGYP--------MDALQLAFSCCGNTGYQQYET-----------------VPSSC-------- 158
            ..:.|.        :|..|..:.|||..|...:..                 ||.||        
 Frog   130 NIRAYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDANASRERCGVPFSCCTKDPAED 194

  Fly   159 -----CGYKDRTKVCEAEIYSQR----PGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCC 214
                 |||..|.|   .|:..|.    .||..:|..:...|..::....:.|||.:    |...|
 Frog   195 VINTQCGYDVRQK---PELDQQETIHTKGCVPQFEKWLQDNLTIVAGVFIGIALLQ----IFGIC 252

  Fly   215 LA 216
            ||
 Frog   253 LA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30160NP_724526.1 Tetraspanin 8..216 CDD:459767 60/256 (23%)
tspan5NP_001072198.1 Tetraspanin 15..258 CDD:459767 62/258 (24%)
TM4SF9_like_LEL 113..233 CDD:239412 25/128 (20%)

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