DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30160 and Tspan31

DIOPT Version :10

Sequence 1:NP_724526.1 Gene:CG30160 / 246490 FlyBaseID:FBgn0050160 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001008379.1 Gene:Tspan31 / 362890 RGDID:1309876 Length:210 Species:Rattus norvegicus


Alignment Length:232 Identity:53/232 - (22%)
Similarity:87/232 - (37%) Gaps:56/232 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AMFKYLLYLLNLVFVAGGILLI----------VVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIG 60
            |..|..|..||:|::..|:|||          ||.||.:.         |||         |.:|
  Rat     7 ACSKNALCALNVVYMLVGLLLIGVAAWGKGLGVVSSIHII---------GGV---------IAVG 53

  Fly    61 SVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDEN 125
            ....::|..|..|.:..:......|.|.:.::|..|..:|....|.|....:.:..|  ..|..:
  Rat    54 VFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFGISCSCLAINRNTQADVINA--SWWVLS 116

  Fly   126 NAAQGYPMDALQLAFSCCG----NTGYQQYETVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDF 186
            |:.:    ..|:.:|.|||    .|.:...:...|:.|  |.|:..|:.        |.:.|:..
  Rat   117 NSTR----HELERSFDCCGLFNLTTVHLHDDASCSALC--KTRSSPCQM--------CGETFLKH 167

  Fly   187 WASNTDLIRWSSLIIALFE-LGIFIMSCCLASAMRKR 222
            ......::....|..:..| ||:::       |||.|
  Rat   168 SDKALKILGGVGLFFSFTEILGVWL-------AMRFR 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30160NP_724526.1 Tetraspanin 8..216 CDD:459767 48/222 (22%)
Tspan31NP_001008379.1 Tetraspanin 9..196 CDD:459767 50/227 (22%)

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