DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30160 and Tsp39D

DIOPT Version :9

Sequence 1:NP_724526.1 Gene:CG30160 / 246490 FlyBaseID:FBgn0050160 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster


Alignment Length:243 Identity:60/243 - (24%)
Similarity:116/243 - (47%) Gaps:40/243 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFV 65
            :.|:    |||.:..||:|...|:|:.:||.::.....:::.|... :..|.||.::::|:...|
  Fly     6 LTCV----KYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSD-HVWTAPIILMIVGAAVAV 65

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAAN--------DKFLSSMGKAVDKAW 122
            :.|.||||.::|::|....:|:..:::|..::.|.:..:..:        .:|.|:|....::| 
  Fly    66 ICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERA- 129

  Fly   123 DENNAAQGYPMDALQLAFSCCGNTGYQQYETV------PSSCCGYKDRTKVCE-AEIYSQRPGCR 180
            |..:|     ...||....|||..|...:|||      |::||...:.::..| ...::.:.||.
  Fly   130 DYRDA-----WTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQHGCL 189

  Fly   181 QEFVDFWASNTDLIRWSSLIIALFELGI-------FIMSCCLASAMRK 221
            |:.::...|.|       ||:|...||:       .:.:|||..:.|:
  Fly   190 QKLLEILDSKT-------LILASVVLGVAGIQMLTILFACCLYRSFRR 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30160NP_724526.1 Tetraspannin 8..219 CDD:278750 58/232 (25%)
tetraspanin_LEL 104..191 CDD:239401 23/101 (23%)
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 59/236 (25%)
tetraspanin_LEL 104..200 CDD:239401 23/101 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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