DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30160 and Tspan12

DIOPT Version :10

Sequence 1:NP_724526.1 Gene:CG30160 / 246490 FlyBaseID:FBgn0050160 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_766595.1 Gene:Tspan12 / 269831 MGIID:1889818 Length:305 Species:Mus musculus


Alignment Length:254 Identity:54/254 - (21%)
Similarity:94/254 - (37%) Gaps:47/254 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNF------TAFDGGVNTQTIPI---CI 56
            :.||    :.|||.|||:|....|.::.|.:.|...:.|.      |..:..|.....|:   .:
Mouse     7 VKCL----RCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVM 67

  Fly    57 IVIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKA 121
            |.:.....:|...|.|||::.|......|...:|::|.::||..:|.:        .....|...
Mouse    68 IAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGTLLVIFCVELACGVWTY--------EQEVMVPVQ 124

  Fly   122 WDE------NNAAQGYP--------MDALQLAFSCCGNTGYQQY------ETVPSSCC--GYKDR 164
            |.:      .....|.|        .:..|..|.|||...:..:      :..|.|||  .:...
Mouse   125 WSDMVTLKARMTNYGLPRYRWLTHAWNYFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGC 189

  Fly   165 TKVCEAEIYSQ--RPGCRQEFVDFWASNTDL--IRWSSLIIALFELGIFIMSCCLASAM 219
            :|....|..|.  :.||.::...|......|  :|:..:.|.:.::...|::..|..|:
Mouse   190 SKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWAL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30160NP_724526.1 Tetraspanin 8..216 CDD:459767 50/242 (21%)
Tspan12NP_766595.1 Tetraspanin 10..246 CDD:459767 52/247 (21%)
TM4SF12_like_LEL 116..218 CDD:239410 19/101 (19%)

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