DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30160 and si:ch73-139j3.4

DIOPT Version :10

Sequence 1:NP_724526.1 Gene:CG30160 / 246490 FlyBaseID:FBgn0050160 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_068074269.1 Gene:si:ch73-139j3.4 / 101884436 ZFINID:ZDB-GENE-140106-202 Length:355 Species:Danio rerio


Alignment Length:244 Identity:50/244 - (20%)
Similarity:96/244 - (39%) Gaps:32/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNF-TAFDGGVNTQTIPICIIVIGSVTFVVAFFG 70
            :.|:...|:|..||..||.:....:.:|....:| :....|...:.:...:..||.|...|:..|
Zfish     9 ILKFFFMLVNAFFVILGISIFACSAWILFDKDSFVSVLSSGQEVKVVAGGLFFIGLVVVGVSLLG 73

  Fly    71 CCGTIRENACCTTIYAICMLILFGLQLALSIWIFAAN---DKFLSSMGKAVDKAWDENNAAQGYP 132
            |.|...|:.|....|...::::...|:.::..:....   ::||......:.|.:..:.....:.
Zfish    74 CAGAYFESRCFIIFYLSFLIVIILGQIFITFVLLIRRKTIEQFLRDKVDEIIKQYGGDEIQTSWK 138

  Fly   133 -MDALQLAFSCCG--NTGYQQYETV----------PSSCCGYKDRTKVCEAEIYS--------QR 176
             :|::|.:..|||  |:...:..||          |.||  :.....|...|.||        :|
Zfish   139 LLDSVQTSARCCGRLNSNEWRNNTVIASLGGTDIYPCSC--FNGTCPVILEETYSFGNGSDVFER 201

  Fly   177 PGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSC----CLASAMRK 221
             ||.:..|::...|..:|....:.:.|.::..||.:.    |:....|:
Zfish   202 -GCEETLVNWLEMNIIVIFGMDVALILIQIMQFIFAVQTFKCIGRKTRE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30160NP_724526.1 Tetraspanin 8..216 CDD:459767 49/236 (21%)
si:ch73-139j3.4XP_068074269.1 Tetraspanin 10..237 CDD:459767 48/229 (21%)
tetraspanin_LEL 117..215 CDD:351888 21/100 (21%)

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