DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30156 and Samd13

DIOPT Version :9

Sequence 1:NP_001260752.1 Gene:CG30156 / 246488 FlyBaseID:FBgn0050156 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_083420.2 Gene:Samd13 / 75015 MGIID:2686498 Length:234 Species:Mus musculus


Alignment Length:241 Identity:65/241 - (26%)
Similarity:112/241 - (46%) Gaps:53/241 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 NHYEVLRISHHATYSEVKRAYHKLALRLHPDKNKSPG----AEQAFRRISEAADCLTDCQKRIEY 156
            |:|:||.:..:|:.|::|||:|:|||::|||||  ||    ||:.|::::||...|:|.:||.:|
Mouse     3 NYYKVLGVPRNASSSDIKRAFHQLALQVHPDKN--PGDKEAAEEKFKQVAEAYHILSDAKKRKDY 65

  Fly   157 -------NIATAVGDCHDQ-DPSQYKDYRGESEFNEANGNDLGAAFRRPYRGANQRMPQRQSLYQ 213
                   |.....||.||: :..:..|.|.|:::.|.      ...||| |...|::.:.:.|:.
Mouse    66 DRSRWNRNKGEIRGDGHDKGETIRVNDSRDETDWEEK------ICSRRP-RHTFQKVTEDEDLFS 123

  Fly   214 TQQLVIGVV-----AALVFLFVTMHFIAGAPAYSFTLTRTHSARRLSRTNHIAYYMNPTTLSKYT 273
            ...|..|.:     |:..|..||.....|     |:...:|.:|        :|..:|.|...|.
Mouse   124 GDCLFSGPITGSRRASSPFFTVTPIMDTG-----FSTFVSHESR--------SYSDDPETFVPYI 175

  Fly   274 EQQLAELEV------------EIEEVYISDLK--HKCRQERSWRDN 305
            .|.:.:..:            .:.:..:.:::  .|...||.:|.|
Mouse   176 SQGMGKFRLVTTCSKTVNGKRVVTKRVVENIRGPKKIENERLFRHN 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30156NP_001260752.1 DnaJ 96..157 CDD:278647 30/71 (42%)
DUF1977 237..334 CDD:286411 14/83 (17%)
Samd13NP_083420.2 DnaJ 2..>67 CDD:223560 30/65 (46%)
DnaJ 3..66 CDD:278647 29/64 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844307
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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