DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galla-1 and ciao-2B

DIOPT Version :10

Sequence 1:NP_611509.1 Gene:galla-1 / 246485 FlyBaseID:FBgn0034543 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_499777.1 Gene:ciao-2B / 185814 WormBaseID:WBGene00009736 Length:160 Species:Caenorhabditis elegans


Alignment Length:122 Identity:63/122 - (51%)
Similarity:81/122 - (66%) Gaps:2/122 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 IYDLLRGIRDPEKPCTLEDLNVVYEDGIFVMPPTRSNVSVVRIEFNPTVPHCSLATLIGLCIRVK 161
            |:||:|.|.|||.|.|||.||||.|:.|.|.  .....:.|::.|.||:||||:||||||.||||
 Worm    41 IFDLIRDINDPEHPYTLEQLNVVQEELIKVF--IDEEETFVKVNFTPTIPHCSMATLIGLAIRVK 103

  Fly   162 VERGLPHNIKLDIYIKKGAHQTEEEINKQINDKERIAAAMENPNLRDLVENCIKDEE 218
            :.|.|...:|:.:.|..|:|.|||.||:|:.||||:||||||..|...|..|::..|
 Worm   104 LLRSLHPKVKVSVSITPGSHSTEESINRQLADKERVAAAMENQGLMHAVNECLRVPE 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galla-1NP_611509.1 COG5133 <94..214 CDD:470001 61/116 (53%)
ciao-2BNP_499777.1 COG5133 <34..156 CDD:470001 61/116 (53%)

Return to query results.
Submit another query.