DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30105 and RNASEH2C

DIOPT Version :10

Sequence 1:NP_725699.1 Gene:CG30105 / 246459 FlyBaseID:FBgn0050105 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_115569.2 Gene:RNASEH2C / 84153 HGNCID:24116 Length:164 Species:Homo sapiens


Alignment Length:140 Identity:40/140 - (28%)
Similarity:58/140 - (41%) Gaps:25/140 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VHYLPAKIDGDGEANVKNYFNNYTREATEFGTGILTNALRGFPLMGEKLKVPEGYCGLVLQETEK 84
            :|.||.::..||.|.|..:|....|:..|.    |..:.||..|.||::.||.|..|.|:...||
Human    29 LHLLPCEVAVDGPAPVGRFFTPAIRQGPEG----LEVSFRGRCLRGEEVAVPPGLVGYVMVTEEK 89

  Fly    85 --------PISDTS-------------DRKLRLTGVFQDFTYWNYDKVPSNGDPYRQALPLPDVA 128
                    |:.|:.             ||.:..|..|..||.|..:.:|......|.||..|.:|
Human    90 KVSMGKPDPLRDSGTDDQEEEPLERDFDRFIGATANFSRFTLWGLETIPGPDAKVRGALTWPSLA 154

  Fly   129 QALSQPISEE 138
            .|:...:.|:
Human   155 AAIHAQVPED 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30105NP_725699.1 RNase_H2-C 21..109 CDD:187752 32/108 (30%)
RNASEH2CNP_115569.2 RNase_H2_suC 28..157 CDD:400782 38/131 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..112 2/20 (10%)

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