DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX6AL and Cox6a2

DIOPT Version :9

Sequence 1:NP_725504.1 Gene:COX6AL / 246451 FlyBaseID:FBgn0050093 Length:94 Species:Drosophila melanogaster
Sequence 2:NP_034073.2 Gene:Cox6a2 / 12862 MGIID:104649 Length:97 Species:Mus musculus


Alignment Length:78 Identity:41/78 - (52%)
Similarity:49/78 - (62%) Gaps:3/78 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GNMPANTAGLWKRVTFLLALPAIVLCAANAFTGHKHVEREPFAKYEYLRRRTKRFPWGDGNRSLF 74
            |...|||   |:.:||:||||.:.||:.|.:....|.||..|..|.:||.|||.|.|||||.:||
Mouse    21 GGAGANT---WRLLTFVLALPGVALCSLNCWMHAGHHERPEFIPYHHLRIRTKPFAWGDGNHTLF 82

  Fly    75 HNAEVNALPEGYE 87
            ||..||.||.|||
Mouse    83 HNPHVNPLPTGYE 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6ALNP_725504.1 Cyt_c_Oxidase_VIa 14..87 CDD:238465 38/72 (53%)
Cox6a2NP_034073.2 Cyt_c_Oxidase_VIa 13..95 CDD:238465 39/76 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848875
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3469
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47989
OrthoDB 1 1.010 - - D1591077at2759
OrthoFinder 1 1.000 - - FOG0001528
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102857
Panther 1 1.100 - - O PTHR11504
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R240
SonicParanoid 1 1.000 - - X1250
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.750

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