DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30091 and F12

DIOPT Version :10

Sequence 1:NP_725484.1 Gene:CG30091 / 246449 FlyBaseID:FBgn0050091 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:258 Identity:79/258 - (30%)
Similarity:126/258 - (48%) Gaps:39/258 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KIVGGVDAGELKNPWMALIKTNDEFICGGSVITNKFVLTAAHCM---CTDEECIVKYTQLTVTLG 97
            ::|||:.|....:|::|.:...|.| |.||:|...:|||||||:   ...||       |||.||
  Rat   361 RVVGGLVALPGSHPYIAALYWGDSF-CAGSLIDPCWVLTAAHCLQKRPAPEE-------LTVVLG 417

  Fly    98 VYHLLATGEHNHPHEIYNVERVY---IHDSFAIQNYRNDIALLRLQ----KSIVYKPQIKPLCIL 155
                  ...||...|......|:   :|:.|:.:.|::|:|||||:    ...:..|.::|:| |
  Rat   418 ------QDRHNQSCERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVC-L 475

  Fly   156 LNDQLKPQTDLIQEFTAIGWG--VTGNGKMSNNLQMVKIYRIDRKMCEAAFWY--TFDYPMFCAG 216
            .:....|...::.|  ..|||  ..|..:.:..||..::..|....|.::..:  .....|.|||
  Rat   476 PSSAAPPSETVLCE--VAGWGHQFEGAEEYATFLQEAQVPFISLDRCSSSNVHGDAILPGMLCAG 538

  Fly   217 -TAVGRDTCKRDSGGPLYIHMLFDGI--KRATQLGIVS--TGTEDCRGFGMYTDVMGHIDFIE 274
             ...|.|.|:.||||||   :..:|:  ::.|..|::|  :|..|....|:||||..::|:|:
  Rat   539 FLEGGADACQGDSGGPL---VCDEGVTERQLTLRGVISWGSGCGDRNKPGVYTDVANYLDWIQ 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30091NP_725484.1 Tryp_SPc 36..273 CDD:214473 78/255 (31%)
Tryp_SPc 332..520 CDD:473915
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 79/257 (31%)
Blue background indicates that the domain is not in the aligned region.

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