DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and Plg

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_445943.1 Gene:Plg / 85253 RGDID:619893 Length:812 Species:Rattus norvegicus


Alignment Length:271 Identity:81/271 - (29%)
Similarity:114/271 - (42%) Gaps:74/271 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RIVRGKEAMLKSAPFMAYL--YYSSEIHCGGTIISSRYILTAAHCM----RP-YLKVRLGEHDIT 101
            |:|.|..|...|.|:...|  .:|.:..||||:||..::||||||:    || :.||.||.|:  
  Rat   581 RVVGGCVANPHSWPWQISLRTRFSGQHFCGGTLISPEWVLTAAHCLEKSSRPEFYKVILGAHE-- 643

  Fly   102 RNPDCQGGSCSPPAEEFDIVLATKYKRFDRFLAN-----------------DIALLKLSRNIRFN 149
                                        :|.|.:                 |||||||||.....
  Rat   644 ----------------------------ERILGSDVQQIAVTKLVLEPNDADIALLKLSRPATIT 680

  Fly   150 VHIQPICLILNPAAAPNVHEFQ-----AFGWGQTETNHSANVLQTTVLTRYDNRHCR--SVLSMP 207
            .::.|.||     .:||.....     ..|||:|:....|..|:...|...:|:.|.  ..|:..
  Rat   681 DNVIPACL-----PSPNYVVADRTLCYITGWGETKGTPGAGRLKEAQLPVIENKVCNRAEYLNNR 740

  Fly   208 ITINQLCVGF--QGSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSF--GDDKCQSPGVYTYVPNY 268
            :...:||.|.  .|.|:|.||||||||. ...|   :|:..|:.|:  |..:...||||..|..|
  Rat   741 VKSTELCAGHLAGGIDSCQGDSGGPLVC-FEKD---KYILQGVTSWGLGCARPNKPGVYVRVSRY 801

  Fly   269 IRWIRYVMQSN 279
            :.||...|:::
  Rat   802 VNWIEREMRND 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 78/262 (30%)
PlgNP_445943.1 PAN_AP_HGF 33..97 CDD:238532
KR 101..183 CDD:214527
KR 183..262 CDD:214527
KR 273..354 CDD:214527
KR 374..456 CDD:214527
KR 480..562 CDD:214527
Tryp_SPc 582..807 CDD:238113 79/263 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.