DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and zgc:153968

DIOPT Version :9

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001070924.1 Gene:zgc:153968 / 768292 ZFINID:ZDB-GENE-061027-211 Length:301 Species:Danio rerio


Alignment Length:280 Identity:84/280 - (30%)
Similarity:128/280 - (45%) Gaps:39/280 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ICMCVCLVLQEQVAANFL-IPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYY--SSEIHCGGT 73
            :.:||..||...::.:.. :..||   .:.:..||:.|:.||..|.|:...::|  :..:.||||
Zfish     5 LAVCVAGVLLLNISGSLCQLDVCG---RAPLKPRIIGGQTAMAGSWPWQVSIHYIPTGGLLCGGT 66

  Fly    74 IISSRYILTAAHCMRPY----LKVRL-----GEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRF 129
            :|:..::|:||.|.:..    |.|.|     |:.::..||..|            |:...||...
Zfish    67 LINREWVLSAAQCFQKLTASNLVVHLGHLSTGDPNVIHNPASQ------------IINHPKYDSA 119

  Fly   130 DRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAFGWGQTETNHS--ANVLQTTVL 192
            ..  .|||||||||..:.|..:|:|:||..:.::..........|||...|..:  ...||...:
Zfish   120 TN--KNDIALLKLSTPVSFTDYIKPVCLTASGSSLGKGAVSWITGWGSINTGGTQFPTTLQEVKI 182

  Fly   193 TRYDNRHCRSVLSMPITINQLCVGFQ--GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDK 255
            ....|..|:|.....||...:|.|..  |...|.||.|||||    ::...:::|.||.|||...
Zfish   183 PVVSNGDCKSAYGSLITDGMICAGPNEGGKGICMGDGGGPLV----HNSSEQWIQSGIASFGRGC 243

  Fly   256 CQ--SPGVYTYVPNYIRWIR 273
            .|  :|||:|.|..|..||:
Zfish   244 AQPKNPGVFTRVSEYESWIK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 44..272 CDD:214473 76/244 (31%)
Tryp_SPc 45..273 CDD:238113 76/244 (31%)
zgc:153968NP_001070924.1 Tryp_SPc 35..262 CDD:214473 76/244 (31%)
Tryp_SPc 36..265 CDD:238113 77/246 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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