DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Prss41

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001128559.1 Gene:Prss41 / 681033 RGDID:1584711 Length:324 Species:Rattus norvegicus


Alignment Length:314 Identity:98/314 - (31%)
Similarity:160/314 - (50%) Gaps:66/314 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IYICMCVCLVL------QEQVAA-------NFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAY 61
            :.:.:.||::|      :|..||       ..|...||  ..:::.:|||.|.|::....|:.|.
  Rat     9 LLLLLVVCVMLGEPGSREENQAAGLKNTDIKLLSMPCG--RRNDIRSRIVGGIESVRGRWPWQAS 71

  Fly    62 LYYSSEIHCGGTIISSRYILTAAHCMRPYL-----KVRLGEHDITRNPDCQGGSCSPPAEEF--- 118
            |.......|||:::|.|::||||||.|.:|     .|:||:  :|..|....      .|.|   
  Rat    72 LRLRKFHRCGGSLLSHRWVLTAAHCFRKFLDPKKWTVQLGQ--LTSKPSFWN------REAFSGR 128

  Fly   119 ----DIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAF--GWGQ 177
                ||::.::    |:...:|:|||:|:.::.:|..|||:|::  |:|:.:.|:.:.:  |||.
  Rat   129 YRVKDIIINSE----DKLKYHDLALLRLASSVTYNKFIQPVCVL--PSASMSQHQPRCWVTGWGA 187

  Fly   178 TETN-------HSANVLQTTVLTRYDNRHCRSVLSMP-----ITINQLCVGFQ--GSDTCSGDSG 228
            .:.:       :....:|.|||   :...|:.:.|..     ||.:..|.|.:  .:||||||||
  Rat   188 LQEDLKPLPPPYHLREVQVTVL---NLSRCQELFSFASRYHLITRDVFCAGAEDGSADTCSGDSG 249

  Fly   229 GPLVTKVNYDGVWRYLQLGIVS--FGDDKCQSPGVYTYVPNYIRWIRYVMQSNG 280
            ||||  .|.||:|  .|:||||  .|..:.:.||:||.|.::..||:.:|..||
  Rat   250 GPLV--CNMDGLW--YQIGIVSRGVGCGRPKLPGIYTNVSHHYDWIKTMMILNG 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 84/257 (33%)
Prss41NP_001128559.1 Tryp_SPc 55..292 CDD:238113 84/257 (33%)

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