DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:281 Identity:92/281 - (32%)
Similarity:126/281 - (44%) Gaps:54/281 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LQEQVAANFLIPSCGVSYESNVAT----RIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYI 80
            |.:|...|.|...||.  ..::.|    ||:.|.:|.....|:...|..::..|||||:||:.::
  Rat   159 LTDQDTENVLTQECGA--RPDLITLSEERIIGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWV 221

  Fly    81 LTAAHCMRPYLKVRLGEHDITRNPD----CQGGSCSPPAEEFDI--VLA-TKYKRFDRFLANDIA 138
            ||||||.|.|           .||.    ..|.|...|.....:  :|| .:|....|  .||||
  Rat   222 LTAAHCFRSY-----------SNPQQWTATFGVSTISPRLRVRVRAILAHAEYNSITR--DNDIA 273

  Fly   139 LLKLSRNIRFNVHIQPICLILNPAAAPN-VHEFQAF--GWGQ-TETNHSANVLQTTVLTRYDNRH 199
            :::|.|.:.|..:|..:||   |||..| :.:..|:  |||. |...::...||...:....:..
  Rat   274 VVQLDRPVTFTRNIHRVCL---PAATQNIIPDSVAYVTGWGSLTYGGNTVTNLQQGEVRIVSSEV 335

  Fly   200 CR-------SVLSMPITINQLCVGFQGS--DTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDK 255
            |.       |||.     ..||.|.:..  |.|.||||||||.:   |....:..:||||:| .:
  Rat   336 CNEPAGYGGSVLP-----GMLCAGVRSGAVDACQGDSGGPLVQE---DTRRLWFVVGIVSWG-YQ 391

  Fly   256 C---QSPGVYTYVPNYIRWIR 273
            |   ..|||||.|..|..|||
  Rat   392 CGLPNKPGVYTRVTAYRNWIR 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 82/250 (33%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 84/252 (33%)
Blue background indicates that the domain is not in the aligned region.

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