DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and cela1.4

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001025669.1 Gene:cela1.4 / 595061 XenbaseID:XB-GENE-22064324 Length:265 Species:Xenopus tropicalis


Alignment Length:255 Identity:80/255 - (31%)
Similarity:111/255 - (43%) Gaps:47/255 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RIVRGKEAMLKSAPFMAYLYYSSEIH----CGGTIISSRYILTAAHCMRPYLKVR--LGEHDITR 102
            |:|.|..|...|.|:...|.|.|..:    ||.::|.:..:||||||:...:..|  ||:|:|..
 Frog    28 RVVGGINAAKNSWPWQVSLQYLSSGYWYHTCGASLIRANRVLTAAHCVDRSVSFRVVLGDHNINA 92

  Fly   103 NPDCQGGSCSPPAEEFDIVLATKYKRFDRFL--AN----------DIALLKLSRNIRFNVHIQPI 155
            |...:                 :|....|.:  ||          |||:|.|:.:...|.:::..
 Frog    93 NDGTE-----------------QYISVSRIIKHANWNTNNIAAGYDIAVLHLASSATLNNYVRLA 140

  Fly   156 CLILNPAAAPNVHEFQAFGWGQTETNHS-ANVLQTTVLTRYDNRHCRSV--LSMPITINQLCVGF 217
            .|..:.....|.|.....|||:|.|..| |.:||...|:...:..|.|.  ....:....:|.|.
 Frog   141 QLPADGVVLANNHGCVVTGWGRTSTGGSLAAILQQAPLSVVAHSTCSSSSWWGSSVKTTMVCAGG 205

  Fly   218 QG-SDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGD-DKC---QSPGVYTYVPNYIRWI 272
            .| ..:|:|||||||...||  ||  |...||||||. ..|   :.|.|:|.|..||.||
 Frog   206 DGVRSSCNGDSGGPLNCAVN--GV--YQVHGIVSFGSASGCNISRKPSVFTRVSAYIAWI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 79/254 (31%)
cela1.4NP_001025669.1 Tryp_SPc 29..263 CDD:238113 79/254 (31%)

Return to query results.
Submit another query.