DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and TMPRSS4

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_005271670.1 Gene:TMPRSS4 / 56649 HGNCID:11878 Length:494 Species:Homo sapiens


Alignment Length:261 Identity:85/261 - (32%)
Similarity:121/261 - (46%) Gaps:46/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCMRPYL----- 91
            :||.|.::   .|:|..:||.:.|.|:...:.|..:..|||:|:...::||||||.|.:.     
Human   195 ACGKSLKT---PRVVGVEEASVDSWPWQVSIQYDKQHVCGGSILDPHWVLTAAHCFRKHTDVFNW 256

  Fly    92 KVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPIC 156
            |||.|...:...|..      ..|:...|.....|.:     .|||||:||...:.|:..::|||
Human   257 KVRAGSDKLGSFPSL------AVAKIIIIEFNPMYPK-----DNDIALMKLQFPLTFSGTVRPIC 310

  Fly   157 L-----ILNPAAAPNVHEFQAFGWGQTETN---HSANVLQTTVLTRYDNRHCRS--VLSMPITIN 211
            |     .|.||.     .....|||.|:.|   .|..:||.:|.. .|:..|.:  .....:|..
Human   311 LPFFDEELTPAT-----PLWIIGWGFTKQNGGKMSDILLQASVQV-IDSTRCNADDAYQGEVTEK 369

  Fly   212 QLCVGFQ--GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKC---QSPGVYTYVPNYIRW 271
            .:|.|..  |.|||.|||||||:.:.:.   |..  :||||:|.. |   .:|||||.|..|:.|
Human   370 MMCAGIPEGGVDTCQGDSGGPLMYQSDQ---WHV--VGIVSWGYG-CGGPSTPGVYTKVSAYLNW 428

  Fly   272 I 272
            |
Human   429 I 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 81/248 (33%)
TMPRSS4XP_005271670.1 LDLa 58..92 CDD:238060
SRCR_2 108..197 CDD:470597 0/1 (0%)
Tryp_SPc 204..429 CDD:214473 80/247 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.