DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and Tmprss11f

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_063129928.1 Gene:Tmprss11f / 498345 RGDID:1560675 Length:489 Species:Rattus norvegicus


Alignment Length:273 Identity:89/273 - (32%)
Similarity:125/273 - (45%) Gaps:47/273 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NFLIPSCGVSYE--------SNVATRIVRGKE-AMLKSAPFMAYLYYSSEIH-CGGTIISSRYIL 81
            |.|...||:...        |:...|||:|:| ||....|:.|.|......| ||.|:||:.::|
  Rat   231 NLLNSRCGIRMSSSNIPLPASSTTERIVQGRETAMEGEWPWQASLQLIGAGHQCGATLISNTWLL 295

  Fly    82 TAAHCMRPYLKVRLGEHDITRNPD----CQGGSCSPPAEEFD---IVLATKYKRFDRFLANDIAL 139
            |||||   :.|        .|:|.    ..|.:.:||..:..   |::..:|.|...  .|||||
  Rat   296 TAAHC---FWK--------NRDPSKWIATFGTTITPPLVKRSVGRIIIHEEYHRDSN--ENDIAL 347

  Fly   140 LKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAFGWGQ-TETNHSANVLQTTVLTRYDNRHC--R 201
            .:|:..:.|:..:|.:||..:....|........|:|. .:...:.|.|:...:....:..|  :
  Rat   348 AQLTSRVEFSNVVQRVCLPDSSMKLPPKTSVFVTGFGSIVDDGPTQNKLRQARVETIGSDVCNQK 412

  Fly   202 SVLSMPITINQLCVGF-QGS-DTCSGDSGGPLVTKVNYDG--VWRYLQLGIVSFGDDKC---QSP 259
            .|....||...||.|| :|. |.|.||||||||    ||.  :| |: :||||:| ..|   ..|
  Rat   413 DVYDGLITPGMLCAGFMEGKVDACKGDSGGPLV----YDNRDIW-YI-VGIVSWG-QSCALPNKP 470

  Fly   260 GVYTYVPNYIRWI 272
            ||||.|..|..||
  Rat   471 GVYTRVSKYRDWI 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 83/247 (34%)
Tmprss11fXP_063129928.1 None

Return to query results.
Submit another query.