DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Jon99Fii

DIOPT Version :9

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_651799.1 Gene:Jon99Fii / 43621 FlyBaseID:FBgn0039777 Length:267 Species:Drosophila melanogaster


Alignment Length:284 Identity:73/284 - (25%)
Similarity:119/284 - (41%) Gaps:48/284 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IYICMCVCLVLQEQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIH--CGG 72
            :::.:.|............|:|:  ...:..:..||..|..|.....|::..|.:|...:  |||
  Fly     5 VFLALAVAAATAIPTPEQKLVPT--PVKDVKIQGRITNGYPAYEGKVPYIVGLLFSGNGNWWCGG 67

  Fly    73 TIISSRYILTAAHCMRPYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFDRF----L 133
            :||.:.::||||||..       |...:|.|   .|.|.....:....|.:..:.:...:    |
  Fly    68 SIIGNTWVLTAAHCTN-------GASGVTIN---YGASLRNQPQYTHWVGSGNFVQHHHYNSGNL 122

  Fly   134 ANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHE-FQ--------AFGWGQT-ETNHSANVLQ 188
            .|||:|::       ..|:. ...::|....|:.:: :|        |.|||.| :.:...:.||
  Fly   123 HNDISLIR-------TPHVD-FWHLVNKVELPSYNDRYQDYAGWWAVASGWGGTYDGSPLPDWLQ 179

  Fly   189 TTVLTRYDNRHCRSVLSMPITINQLCVGFQ-GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSF- 251
            ...:.......|..  |..:..|.:|:... |..||.|||||||||   ::|   ...:|:.|| 
  Fly   180 AVDVQIMSQSDCSR--SWSLHDNMICINTNGGKSTCGGDSGGPLVT---HEG---NRLVGVTSFV 236

  Fly   252 GDDKCQS--PGVYTYVPNYIRWIR 273
            ....|||  |.|::.|..|:.|||
  Fly   237 SSAGCQSGAPAVFSRVTGYLDWIR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 44..272 CDD:214473 67/247 (27%)
Tryp_SPc 45..273 CDD:238113 67/247 (27%)
Jon99FiiNP_651799.1 Tryp_SPc 37..259 CDD:214473 67/247 (27%)
Tryp_SPc 38..262 CDD:238113 69/249 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436006
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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