DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and CG11842

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:291 Identity:98/291 - (33%)
Similarity:138/291 - (47%) Gaps:43/291 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VLQEQVAANFLIPSCGVSYE-----SNVATRIVRGKEAMLKSAPFMAYLYYSS-----EIHCGGT 73
            |.:|....:|||.:..:.|:     ::.|..|:.|..|:.|..|..|.|.:..     |..||||
  Fly    42 VWEETSEFSFLIENAPIIYKTLDKCTSYAPLIIGGGPAVPKEFPHAARLGHKDENGEVEWFCGGT 106

  Fly    74 IISSRYILTAAHC-MRPYLKV---RLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFD-RFL 133
            :||.|::|||||| ..|...|   |||:.:...|.|    ...|  |:||:...|.:..|. ..:
  Fly   107 LISDRHVLTAAHCHYSPQGSVNIARLGDLEFDTNND----DADP--EDFDVKDFTAHPEFSYPAI 165

  Fly   134 ANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAFGWGQTE----TNHSANVLQTTVLTR 194
            .|||::::|||.:.||.:..|.||..:......  .|.|.||||.|    |.:..  ||...|..
  Fly   166 YNDISVVRLSRPVTFNDYKHPACLPFDDGRLGT--SFIAIGWGQLEIVPRTENKK--LQKVKLYN 226

  Fly   195 YDNRHCRSVL----SMPITIN---QLCVGF-QGSDTCSGDSGGP-LVTKVNYDGVWRYLQLGIVS 250
            |..| ||...    .:|...|   |||:|. :..|||:|||||| |:..::|..:  |..:||.|
  Fly   227 YGTR-CRITADRNDELPEGYNATTQLCIGSNEHKDTCNGDSGGPVLIYHMDYPCM--YHVMGITS 288

  Fly   251 FG--DDKCQSPGVYTYVPNYIRWIRYVMQSN 279
            .|  .|....|.:||.|..|:.||:..:..|
  Fly   289 IGVACDTPDLPAMYTRVHFYLDWIKQQLAKN 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 89/252 (35%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 90/254 (35%)

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