DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and CG11842

DIOPT Version :9

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:291 Identity:98/291 - (33%)
Similarity:138/291 - (47%) Gaps:43/291 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VLQEQVAANFLIPSCGVSYE-----SNVATRIVRGKEAMLKSAPFMAYLYYSS-----EIHCGGT 73
            |.:|....:|||.:..:.|:     ::.|..|:.|..|:.|..|..|.|.:..     |..||||
  Fly    42 VWEETSEFSFLIENAPIIYKTLDKCTSYAPLIIGGGPAVPKEFPHAARLGHKDENGEVEWFCGGT 106

  Fly    74 IISSRYILTAAHC-MRPYLKV---RLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFD-RFL 133
            :||.|::|||||| ..|...|   |||:.:...|.|    ...|  |:||:...|.:..|. ..:
  Fly   107 LISDRHVLTAAHCHYSPQGSVNIARLGDLEFDTNND----DADP--EDFDVKDFTAHPEFSYPAI 165

  Fly   134 ANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAFGWGQTE----TNHSANVLQTTVLTR 194
            .|||::::|||.:.||.:..|.||..:......  .|.|.||||.|    |.:..  ||...|..
  Fly   166 YNDISVVRLSRPVTFNDYKHPACLPFDDGRLGT--SFIAIGWGQLEIVPRTENKK--LQKVKLYN 226

  Fly   195 YDNRHCRSVL----SMPITIN---QLCVGF-QGSDTCSGDSGGP-LVTKVNYDGVWRYLQLGIVS 250
            |..| ||...    .:|...|   |||:|. :..|||:|||||| |:..::|..:  |..:||.|
  Fly   227 YGTR-CRITADRNDELPEGYNATTQLCIGSNEHKDTCNGDSGGPVLIYHMDYPCM--YHVMGITS 288

  Fly   251 FG--DDKCQSPGVYTYVPNYIRWIRYVMQSN 279
            .|  .|....|.:||.|..|:.||:..:..|
  Fly   289 IGVACDTPDLPAMYTRVHFYLDWIKQQLAKN 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 44..272 CDD:214473 88/252 (35%)
Tryp_SPc 45..273 CDD:238113 89/252 (35%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 90/254 (35%)
Tryp_SPc 73..312 CDD:214473 88/251 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437590
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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