DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and CG11841

DIOPT Version :9

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster


Alignment Length:283 Identity:95/283 - (33%)
Similarity:135/283 - (47%) Gaps:38/283 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LVLQEQVAANFLIPSCGVSYES-----NVATRIVRGKEAMLKSAPFMAYLYY---SSEI--HCGG 72
            :|.:|:||.:|......::||:     .....||.|..|..|..||.|.|.:   ::||  .|||
  Fly    40 IVFEERVAISFFFTDAPITYETVDSCHGSRPLIVDGTPAEPKEFPFAARLGHRKTNNEIKWFCGG 104

  Fly    73 TIISSRYILTAAHCM----RPYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFDR-F 132
            |:||:|.:||||||.    .....|||||.:...:.|    ...|  |:|.::....:..|:. .
  Fly   105 TLISNRLVLTAAHCFFSEHGEVNVVRLGELEFDTDTD----DAEP--EDFGVLALKAHPGFENPQ 163

  Fly   133 LANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHE-FQAFGWGQTE-TNHSANVLQTTVLTRY 195
            |.|||.:::|.|.::||.:..|.||   |......|| |.|.||||.: ....:..|....|..|
  Fly   164 LYNDIGIVQLDREVKFNRYKHPACL---PFDDGEQHESFIAIGWGQKKFAQKESKKLLKVQLQGY 225

  Fly   196 DNRHCRSVLSMPITIN------QLCVGFQ-GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGD 253
            .:|...||.:.....|      |||:|.: ..|||:|||||| |...:.|....|..:||.|.| 
  Fly   226 KDRCVSSVDANDELPNGYEPKSQLCIGSRDNKDTCNGDSGGP-VLAYHKDLACMYHVMGITSAG- 288

  Fly   254 DKCQSPGV---YTYVPNYIRWIR 273
            ..|.:|.:   ||.|..::.||:
  Fly   289 ITCSTPDIPSAYTRVHYFLNWIK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 44..272 CDD:214473 86/249 (35%)
Tryp_SPc 45..273 CDD:238113 87/249 (35%)
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 87/249 (35%)
Tryp_SPc 72..310 CDD:214473 86/248 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437591
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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