DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and CG13318

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_649831.1 Gene:CG13318 / 41048 FlyBaseID:FBgn0037627 Length:405 Species:Drosophila melanogaster


Alignment Length:267 Identity:75/267 - (28%)
Similarity:122/267 - (45%) Gaps:43/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHC-GGTIISSRYILTAAHCM----RPYLK 92
            ||..:.....:......:|...:.|:.|.|..:::::. ||.:|:::::|||||.:    ..|.|
  Fly   151 CGRRFPPPPGSTTAAPGQASFGAYPWQAALLTTADVYLGGGALITAQHVLTAAHKVYNLGLTYFK 215

  Fly    93 VRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKY--KRFD-RFLANDIALLKLSRNIRFNVH--I 152
            |||||.|        ..|.|.|....|:.::..|  ..|: ..|.||:|:||||..:.....  :
  Fly   216 VRLGEWD--------AASTSEPIPAQDVYISNVYVNPSFNPNNLQNDVAILKLSTPVSLTSKSTV 272

  Fly   153 QPICLILNPAAAPNVHEFQAFGWGQTE---TNHSANVLQTTVLTRYDNRHCRSVLS--------- 205
            ..:||   |..:.........|||:.:   |.....:.:...:....|.:|::.|.         
  Fly   273 GTVCL---PTTSFVGQRCWVAGWGKNDFGATGAYQAIERQVDVPLIPNANCQAALQATRLGSSFV 334

  Fly   206 -MPITINQLCVGFQ-GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQS--PGVYTYVP 266
             .|.:.  :|.|.: |.|.|:||.|.|||...|  ||| |: :|:|::|....|:  ||||..|.
  Fly   335 LSPTSF--ICAGGEAGKDACTGDGGSPLVCTSN--GVW-YV-VGLVAWGIGCAQAGVPGVYVNVG 393

  Fly   267 NYIRWIR 273
            .|:.||:
  Fly   394 TYLPWIQ 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 72/253 (28%)
CG13318NP_649831.1 CLIP_1 <91..145 CDD:465709
Tryp_SPc 169..402 CDD:238113 73/249 (29%)
Blue background indicates that the domain is not in the aligned region.

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