DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Try10

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001004097.1 Gene:Try10 / 408247 RGDID:1359400 Length:246 Species:Rattus norvegicus


Alignment Length:248 Identity:81/248 - (32%)
Similarity:121/248 - (48%) Gaps:36/248 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RIVRGKEAMLKSAPFMAYLYYSSEIH-CGGTIISSRYILTAAHCMRPYLKVRLGEHDITRNPDCQ 107
            :||.|......|.|:...|  :|..| |||::|:.:::::||||.:..::||||||:|.   ..:
  Rat    23 KIVGGYTCQENSVPYQVSL--NSGYHFCGGSLINEQWVVSAAHCYKSRIQVRLGEHNIN---VLE 82

  Fly   108 GGSCSPPAEEFDIVLATKYKRFDRF----LANDIALLKLSRNIRFNVHIQPICLILNPAA-APNV 167
            |.      |:|  |.|.|..:...|    |.|||.|:|||..::.|..:..:.|   |:: ||..
  Rat    83 GN------EQF--VNAAKIIKHPNFIRKTLNNDIMLIKLSSPVKLNSRVATVAL---PSSCAPAG 136

  Fly   168 HEFQAFGWGQTET--NHSANVLQTTVLTRYDNRHCRSVLSMPITINQLCVGF--QGSDTCSGDSG 228
            .:....|||.|.:  .:..::||...........|.:.....||.|.:|.||  .|.|:|.||||
  Rat   137 TQCLISGWGNTLSFGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCAGFLEGGKDSCQGDSG 201

  Fly   229 GPLVTKVNYDGV--WRYLQLGIVSFGDDKCQSPGVYTYVPNYIRWIRYVMQSN 279
            ||:|......|:  |.|        |.....:|||||.|.||:.||:..:.:|
  Rat   202 GPVVCNGELQGIVSWGY--------GCALPDNPGVYTKVCNYVDWIQDTIAAN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 79/239 (33%)
Try10NP_001004097.1 Tryp_SPc 24..242 CDD:238113 80/241 (33%)

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