DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Mcpt1l3

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_038949770.1 Gene:Mcpt1l3 / 408209 RGDID:1302933 Length:270 Species:Rattus norvegicus


Alignment Length:301 Identity:90/301 - (29%)
Similarity:136/301 - (45%) Gaps:66/301 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLASTSIYICM-CV---C-LVLQEQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLY 63
            ||:.:.|::|. ||   | ||..:.|   ||:|.           .||.|.|::..|.|:||:|.
  Rat    10 SLSFSPIFLCQYCVGGPCKLVTGDWV---FLVPE-----------EIVGGVESIPHSRPYMAHLK 60

  Fly    64 YSSE----IHCGGTIISSRYILTAAHCMRPYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLAT 124
            .::|    ..|||.:||.:::||||||....:.|.||.||:::....|        ::..:....
  Rat    61 ITTEKGYVTFCGGFLISRQFVLTAAHCNGREITVTLGAHDVSKRESTQ--------QKLKVEKQI 117

  Fly   125 KYKRFDRFLAN--DIALLKLSRNIRFN--VHIQPICLILNPAAAPNVHEF-------QAFGWGQT 178
            .:|.:: |.:|  ||.||||.:.:...  |.:.|:         |:..:|       ||.|||||
  Rat   118 IHKNYN-FFSNIHDIMLLKLEKQVELTPAVDVVPL---------PSPSDFIDPGTMCQAAGWGQT 172

  Fly   179 ETNHSAN---VLQTTVLTRYDNRHCRSVLSMPITINQLCVGFQG--SDTCSGDSGGPLVTKVNYD 238
            ......:   .|:...|...|...|:......... |:|||..|  .....|||||||:..    
  Rat   173 GVTDPTSYTYTLREVELRIMDVEACKIFSDYDYNF-QMCVGSPGRMRSPYEGDSGGPLLCA---- 232

  Fly   239 GVWRYLQLGIVSFGDDKCQSPGVYTYVPNYIRWIRYVMQSN 279
            ||..    ||||.|.:..:.|.|:|.:..|:.||..|:.::
  Rat   233 GVAH----GIVSHGREDAKPPAVFTRISPYVPWINIVLSAS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 75/247 (30%)
Mcpt1l3XP_038949770.1 Tryp_SPc 42..263 CDD:238113 75/247 (30%)

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