DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and MP1

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001303421.1 Gene:MP1 / 40541 FlyBaseID:FBgn0027930 Length:400 Species:Drosophila melanogaster


Alignment Length:275 Identity:93/275 - (33%)
Similarity:139/275 - (50%) Gaps:37/275 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSE-----IHCGGTIISSRYILTAAHCMR 88
            :.|:||    .|...|:|.|.|...:..|:||.:.|:..     .||||::|:.||:||||||:.
  Fly   126 MAPNCG----ENFGDRVVGGNETTKREFPWMALIEYTKPGNVKGHHCGGSLINHRYVLTAAHCVS 186

  Fly    89 ------PYLKVRLGEHDITRNPDCQGG-----SCSPPAEEFDI---VLATKYKRFDRFLANDIAL 139
                  ....|||||.|.:.||||..|     .|:.|..::.:   :...:|....|...|||||
  Fly   187 AIPSDWELTGVRLGEWDASTNPDCTVGKNGRRDCNEPYVDYPVEERIPHPQYPGNSRDQLNDIAL 251

  Fly   140 LKLSRNIRFNVHIQPICLILNPAAAPNV---HEFQAFGWGQTETNHSANV-----LQTTVLTRYD 196
            |:|...::::..|.|:||....:...|:   .:....|||:||||.::|:     |.|...:..:
  Fly   252 LRLRDEVQYSDFILPVCLPTLASQHNNIFLGRKVVVAGWGRTETNFTSNIKLKAELDTVPTSECN 316

  Fly   197 NRHCRSVLSMPITINQLCV-GFQGSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQS-- 258
            .|:  :.....:|..|:|. |.:|.|:|.|||||||:.:...:|...|...|:||:|...|..  
  Fly   317 QRY--ATQRRTVTTKQMCAGGVEGVDSCRGDSGGPLLLEDYSNGNSNYYIAGVVSYGPTPCGLKG 379

  Fly   259 -PGVYTYVPNYIRWI 272
             |||||.|..|:.||
  Fly   380 WPGVYTRVEAYLNWI 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 88/259 (34%)
MP1NP_001303421.1 CLIP 29..91 CDD:463440
Tryp_SPc 138..397 CDD:238113 88/259 (34%)
Blue background indicates that the domain is not in the aligned region.

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