DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and LPA

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:245 Identity:77/245 - (31%)
Similarity:107/245 - (43%) Gaps:34/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IVRGKEAMLKSAPFMAYLYYSSEIH-CGGTIISSRYILTAAHCM----RP-YLKVRLGEHDITRN 103
            ||.|..|...|.|:...|......| ||||:||..::||||||:    || ..||.||.|     
Human  1820 IVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCLKKSSRPSSYKVILGAH----- 1879

  Fly   104 PDCQGGSCSPPAEEFDIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVH 168
               |..:.....:|.::     .:.|......|||||||||.......:.|.||...........
Human  1880 ---QEVNLESHVQEIEV-----SRLFLEPTQADIALLKLSRPAVITDKVMPACLPSPDYMVTART 1936

  Fly   169 EFQAFGWGQTETNHSANVLQTTVLTRYDNRHCRSVLSMPITINQLCVGF--QGSDTCSGDSGGPL 231
            |....|||:|:......:|:...|...:|..|..       ...:|...  :|:|:|.|||||||
Human  1937 ECYITGWGETQGTFGTGLLKEAQLLVIENEVCNH-------YKYICAEHLARGTDSCQGDSGGPL 1994

  Fly   232 VTKVNYDGVWRYLQLGIVSF--GDDKCQSPGVYTYVPNYIRWIRYVMQSN 279
            |. ...|   :|:..|:.|:  |..:...||||..|..::.||..:|::|
Human  1995 VC-FEKD---KYILQGVTSWGLGCARPNKPGVYARVSRFVTWIEGMMRNN 2040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 74/237 (31%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388
KR 1386..1466 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527
Kringle 1720..1799 CDD:395005
Tryp_SPc 1820..2034 CDD:238113 74/237 (31%)
Blue background indicates that the domain is not in the aligned region.

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