DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and sphinx2

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_729256.2 Gene:sphinx2 / 38833 FlyBaseID:FBgn0052382 Length:253 Species:Drosophila melanogaster


Alignment Length:293 Identity:64/293 - (21%)
Similarity:111/293 - (37%) Gaps:90/293 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYS----SEIHCG-GTIISSRYILTA 83
            ||...|..:..|..::.::.||..|..|...:..::..:.|:    |.:..| |||||:::|||.
  Fly     5 VALLVLSLTFSVCEKNKLSPRITGGYRAKPYTIIYLVGIVYAKSPLSSLKFGAGTIISNQWILTV 69

  Fly    84 AHCM-RPYLKVRLGE------HDITRNPDCQGGSCSPPAEEF-------DIVLATK--YKRFDRF 132
            ...: ..|::...|.      :||.|          ...|.|       .|:...|  |::||| 
  Fly    70 KEVLIFKYIEAHFGSKRAFWGYDILR----------IYRENFYFHYDKTRIIALVKCPYQKFDR- 123

  Fly   133 LANDIALLKLSR------NIRFNVHIQPICLILNPAAAPNVHEFQAFGWGQTETN---------H 182
                    ::||      ..||..::..:.::.              |||..:..         .
  Fly   124 --------RMSRVRVPAYGARFERYVGNMTMVC--------------GWGTDKRKVRLPTWMRCV 166

  Fly   183 SANVLQTTVLTRYDNRHCRSVLSMPITINQLCV---GFQGSDTCSGDSGGPLVTKVNYDGVWRYL 244
            ...|:..|...:|..         |:...::|.   ||:|  .|.||.||.:|| :..:..:   
  Fly   167 EVEVMNNTECAKYHT---------PLKWYEMCTSGEGFKG--VCEGDMGGAVVT-MGPNPTF--- 216

  Fly   245 QLGIVSFGDDKCQ--SPGVYTYVPNYIRWIRYV 275
             :||:......|.  .|.|:..|.::|:||::|
  Fly   217 -IGIIWLMPTNCSIGYPSVHIRVSDHIKWIKHV 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 57/268 (21%)
sphinx2NP_729256.2 Tryp_SPc 25..245 CDD:473915 57/268 (21%)

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