DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and CG10469

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster


Alignment Length:290 Identity:90/290 - (31%)
Similarity:132/290 - (45%) Gaps:62/290 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LVLQEQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYL--YYSSEIH----CGGTIIS 76
            ::||..:...|.:    |..:...:.||:.|..|..|..|:...|  |:.....    |||||:|
  Fly     1 MILQLVLIVQFSL----VFGQETGSLRIMNGTAAKAKQLPYQVGLLCYFEGSKDEPNMCGGTILS 61

  Fly    77 SRYILTAAHCMRP------YLKVRLGEHDITRNPDCQGGSCSPPAEEFD---IVLATKY----KR 128
            :|:|:|||||::.      .:.:.:|:                 .:.||   ||:...|    |:
  Fly    62 NRWIITAAHCLQDPKSNLWKVLIHVGK-----------------VKSFDDKEIVVNRSYTIVHKK 109

  Fly   129 FDR-FLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAF--GWGQTETNHSANVLQTT 190
            ||| .:.|||||:||.:.:.||.:|||..|   |:|.......:|.  |||.|.....:.|||..
  Fly   110 FDRKTVTNDIALIKLPKKLTFNKYIQPAKL---PSAKKTYTGRKAIISGWGLTTKQLPSQVLQYI 171

  Fly   191 VLTRYDNRHCR-------SVLSMPITINQ-LCVGFQGSDTCSGDSGGPLVTKVNYDGVWRYLQLG 247
            ......|:.|.       ...|..:..|. :|:..:....|.||||||:|..   ||. |.| :|
  Fly   172 RAPIISNKECERQWNKQLGGKSKKVVHNGFICIDSKKGLPCRGDSGGPMVLD---DGS-RTL-VG 231

  Fly   248 IVSFGDD---KCQSPGVYTYVPNYIRWIRY 274
            |||.|.|   |.:.|.|.|.|.:|::||:|
  Fly   232 IVSHGFDGECKLKLPDVSTRVSSYLKWIKY 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 83/260 (32%)
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 83/260 (32%)

Return to query results.
Submit another query.