DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Jon65Aii

DIOPT Version :9

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_648014.1 Gene:Jon65Aii / 38684 FlyBaseID:FBgn0035666 Length:259 Species:Drosophila melanogaster


Alignment Length:251 Identity:74/251 - (29%)
Similarity:104/251 - (41%) Gaps:55/251 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RIVRGKEAMLKSAPFMAYLYYSS----EIHCGGTIISSRYILTAAHCM--RPYLKVRLGEHDITR 102
            ||..|..|.....|::..|.:.:    ..:|||:||...::||||||.  ..|:.:..|.  :.|
  Fly    36 RITNGYPAYEGKVPYIVALRFDNGNGGGWYCGGSIIGHEWVLTAAHCTYGASYVTISYGA--VWR 98

  Fly   103 NPDCQGGSCSPPAEEFDIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAP-- 165
            .        .|....:|          ...|.|||||::       ..|:. ...::|....|  
  Fly    99 Q--------QPQFTHYD----------TGNLHNDIALIR-------TPHVD-FWSLVNKVELPRY 137

  Fly   166 -----NVHEFQAF--GWG-QTETNHSANVLQTTVLTRYDNRHCRSVL-SMPITINQLCVGF-QGS 220
                 |.:.:.|.  ||| .::::...:.|....:...||..|.... |..||.|.||... :..
  Fly   138 DDRYNNFYGWWALLSGWGSSSDSSGMTDYLNCVDIQISDNSVCLDYYGSHYITSNHLCYATPENK 202

  Fly   221 DTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDK-C--QSPGVYTYVPNYIRWIR 273
            .:||||||||||.   :||   ..|:||||||... |  .||...|.|..|:.|||
  Fly   203 GSCSGDSGGPLVL---HDG---NRQVGIVSFGSAAGCLSNSPKGLTRVTGYLDWIR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 44..272 CDD:214473 71/248 (29%)
Tryp_SPc 45..273 CDD:238113 71/248 (29%)
Jon65AiiNP_648014.1 Tryp_SPc 36..251 CDD:214473 71/248 (29%)
Tryp_SPc 37..254 CDD:238113 73/250 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435643
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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