DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Jon65Aiv

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster


Alignment Length:294 Identity:82/294 - (27%)
Similarity:124/294 - (42%) Gaps:70/294 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LVLQEQVAANFLIPSCGVSYES-------NVATRIVRGKEAMLKSAPFMAYLYYS----SEIHCG 71
            ::|...|||: ..|...:.:.|       ::..||..|..|.:...|:...|...    |...||
  Fly     5 IILALAVAAS-AFPEPELRHRSREMPVVGDIGGRITGGSNAAVGQFPYQVGLSLKLSALSSAWCG 68

  Fly    72 GTIISSRYILTAAHC------MRPYLKVRLGEHDITRNPDCQGGSCSPPAE------EFDIVLAT 124
            |::|.|.::||||||      :..||                |.:....||      ..||::.:
  Fly    69 GSLIGSTWVLTAAHCTDGVQSVTVYL----------------GATVRTSAEITHTVSSSDIIIHS 117

  Fly   125 KYKRFDRFLANDIALLKL---SRNIRFNVHIQPICLILNPAAAPNVHEF-----QAFGWGQTETN 181
            .:...:  |.|||:|:|:   |.:.|       |..:..|:.:.:...|     .|.|||:|...
  Fly   118 GWNSAN--LRNDISLIKIPATSSSSR-------ISAVKLPSISNSYSTFVGDVAVASGWGRTSDT 173

  Fly   182 HS--ANVLQTTVLTRYDNRHCRSVL-SMPITINQLCVG-FQGSDTCSGDSGGPLVTKVNYDGVWR 242
            .|  |..||...||...|..|.... :..:|.:.|||. .....||:||||||||.|.:.:    
  Fly   174 SSGVATNLQYVDLTVITNTKCAQTYGTSVVTDSTLCVATTDAKSTCNGDSGGPLVLKSSSE---- 234

  Fly   243 YLQLGIVSFGDDK-CQS--PGVYTYVPNYIRWIR 273
              |:|:.|||... |:.  |..:|.|.:|:.||:
  Fly   235 --QIGLTSFGASAGCEKGYPAAFTRVTSYLDWIK 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 74/258 (29%)
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 74/258 (29%)

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