DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and Ser8

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster


Alignment Length:252 Identity:73/252 - (28%)
Similarity:107/252 - (42%) Gaps:45/252 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCMR-----PYLKVRLGEH 98
            |::..|||.|..:.::..|:...|..|....|||:|||:..|:|||||:.     ..|::|.|. 
  Fly    29 SSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGS- 92

  Fly    99 DITRNPDCQGGSCSPPAEEFDIVLATKYKRFDRFLA----NDIALLKLSRNIRFNVHIQPICLIL 159
                |....||.         :|.....|..:.:.:    |||.:::|...:.|...|:.|.:  
  Fly    93 ----NKRTYGGV---------LVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITM-- 142

  Fly   160 NPAAAPNVHEFQA--FGWGQTETNHSANVLQTTVLTRYDNR-HCRSV---LSMPITINQLCVGFQ 218
              |:|...|...|  .|||:|.|:..::.....|.||...| .|.|.   ....|....:|....
  Fly   143 --ASATPAHGSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAAT 205

  Fly   219 GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKC---QSPGVYTYVPNYIRWI 272
            ..|.|.||||||||:....        :|:||:|.| |   ..||||..:.....|:
  Fly   206 NKDACQGDSGGPLVSGGQL--------VGVVSWGRD-CAVANYPGVYANIAELRDWV 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 71/246 (29%)
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 70/244 (29%)

Return to query results.
Submit another query.