DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and CG18478

DIOPT Version :9

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster


Alignment Length:281 Identity:76/281 - (27%)
Similarity:116/281 - (41%) Gaps:54/281 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CG------VSYESNVATRIVRGKEAMLKSA--PFMAYLYYSSEIHCGGTIISSRYILTAAHCMRP 89
            ||      |..:.||.       |...|.|  |:...:.::..:..||::|:...:|||||  |.
  Fly    31 CGYGNPDAVKVQFNVT-------EGQAKPAEFPWTIAVIHNRSLVGGGSLITPDIVLTAAH--RI 86

  Fly    90 YLK------VRLGEHDITRNPDCQGGSC--SPPAEEFDIVLATKYKRFD-RFLANDIALLKLSRN 145
            :.|      |..||.:.        ||.  ..|.||..::....:|.|: :..||::|||.|.|.
  Fly    87 FNKDVEDIVVSAGEWEY--------GSALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDRE 143

  Fly   146 IRFNVHIQPICLILNPAAAPNVHEFQAFGWG--QTETNHSANVLQTTVLTRYDNRHCRSVL---- 204
            ......|..|||.....:..:.....| |||  |....|...||:...|.......|:..|    
  Fly   144 FPLTYKINTICLPTQKRSLSSTRCIVA-GWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRKTR 207

  Fly   205 -----SMPITINQLCVGFQ-GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQS---PG 260
                 ::|..:  :|.|.: .:|.|:||.||.|...:..|.. ::.|:|||::|.. |:.   |.
  Fly   208 LGQNYTLPRGL--ICAGGEKDNDACTGDGGGALFCPMTEDPK-QFEQIGIVNWGVG-CKEKNVPA 268

  Fly   261 VYTYVPNYIRWIRYVMQSNGY 281
            .||.|..:..||...::.|.|
  Fly   269 TYTDVFEFKPWIVQQIKENLY 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 44..272 CDD:214473 67/253 (26%)
Tryp_SPc 45..273 CDD:238113 68/253 (27%)
CG18478NP_609764.1 Tryp_SPc 50..283 CDD:238113 68/247 (28%)
Tryp_SPc 50..280 CDD:214473 66/244 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24256
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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