DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and LOC3290331

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_564960.4 Gene:LOC3290331 / 3290331 VectorBaseID:AGAMI1_006728 Length:316 Species:Anopheles gambiae


Alignment Length:289 Identity:84/289 - (29%)
Similarity:121/289 - (41%) Gaps:65/289 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYL--YYSSEIH-CGGTIISSRYILTA 83
            :.:.|:|..|:.......|  .|||.|:||.....|:...|  .::|.:. ||.:||:.||:|||
Mosquito    45 DHIKAHFRTPTTATQNTPN--RRIVNGQEARPGQFPYQVALLGQFNSGVGLCGASIITQRYVLTA 107

  Fly    84 AHCMRPYLKVR-----------LGEHD-ITRNPDCQ------GGSCSPPAEEFDIVLATKYKRFD 130
            |||:  |:.|.           ||.|: :...|..|      .|....|.          |..||
Mosquito   108 AHCV--YIGVDASTPVANGTAILGAHNRMIEEPSQQRITFSASGVIGHPG----------YDLFD 160

  Fly   131 RFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAF--------GWGQTETNHSA--- 184
              :.||||:::|...|.:...||||.|       |...:.:.|        |:|...|.:..   
Mosquito   161 --VRNDIAVVRLDEPILYTDRIQPIRL-------PGRSDTRTFAGLMGTVSGYGVYSTANPGLSD 216

  Fly   185 --NVLQTTVLTRYDNRHCRSVLSMPITINQLC-VGFQGSDTCSGDSGGPLVTKVNYDGVWRYLQL 246
              |.:...::|..|.|...|.....|....:| .|..|...|:.||||||..:.|.:.    ||:
Mosquito   217 VLNYVLNPIITNADCRAAWSGFEWLIEPQNVCQSGDGGRSACNSDSGGPLTVQDNGES----LQV 277

  Fly   247 GIVSFGD-DKCQS--PGVYTYVPNYIRWI 272
            |:||||. ..|.:  |.|:..|..|:.||
Mosquito   278 GVVSFGSAGGCDNGIPTVFARVTYYLDWI 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 79/266 (30%)
LOC3290331XP_564960.4 None

Return to query results.
Submit another query.