DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_795998.2 Gene:Tmprss11b / 319875 MGIID:2442893 Length:416 Species:Mus musculus


Alignment Length:256 Identity:79/256 - (30%)
Similarity:116/256 - (45%) Gaps:35/256 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCMRPYLKVRL 95
            |....:|:     ||..|..|.....|:.|.|..:.:.:||.::|..|::||||||.:.      
Mouse   176 PRMSATYD-----RITGGSTAHKGEWPWQASLRVNGKHYCGASLIGERFLLTAAHCFQG------ 229

  Fly    96 GEHDITRNP---DCQGGSCSPPA----EEFDIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQ 153
                 |.||   ....|:...||    ...:|::...|.:.:..  :|:|::||:..:.||..:.
Mouse   230 -----TNNPKNLTVSFGTRVTPAYMQHSVQEIIIHEDYVKGEHH--DDVAVIKLTEKVSFNNDVH 287

  Fly   154 PICLILNPAAAPNVHEFQAFGWGQTETN-HSANVLQTTVLTRYDNRHCRS--VLSMPITINQLCV 215
            .:||..:....|........|||....| .|..:||...:...|...|.|  .....|....||.
Mouse   288 RVCLPESTQIFPPGEGVVVTGWGSFSYNGKSPLLLQKASIKIIDTNTCNSEEAYGGRIVDTMLCA 352

  Fly   216 GF-QGS-DTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDD--KCQSPGVYTYVPNYIRWI 272
            |: :|| |.|.||||||||...:.| :| || :||||:|.:  :...||||..|.:|..||
Mouse   353 GYLEGSIDACQGDSGGPLVHPNSRD-IW-YL-VGIVSWGHECGRVNKPGVYMRVTSYRNWI 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 76/242 (31%)
Tmprss11bNP_795998.2 SEA 46..143 CDD:460188
Tryp_SPc 185..413 CDD:238113 76/242 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.