DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Ovch2

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:314 Identity:93/314 - (29%)
Similarity:137/314 - (43%) Gaps:67/314 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IYICMCVCLVLQEQ----VAANFLIPSCGVSYES-------NVATRIVRGKEAMLKSAPFMAYLY 63
            |.|...|||   ||    ..::...|.||.|...       ::.:|||.|.:....|.|:...|.
  Rat     9 ILILGIVCL---EQGHSATLSSIRAPDCGKSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLK 70

  Fly    64 YSSEIHCGGTIISSRYILTAAHCMRP-----YLKVRLGEHDITRNPDCQGGSCSPPAEEF----D 119
            ...:..||||||||::::||||||..     .|.|..||||:::         :.|.|:.    .
  Rat    71 QKQKHICGGTIISSQWVITAAHCMANRNIALTLNVTAGEHDLSQ---------AEPGEQTLAIET 126

  Fly   120 IVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQA------FGWGQ- 177
            |::..::.. .:.:..||||||:....:|...::|:||     ..|. .:|.|      .|||: 
  Rat   127 IIIHPQFST-KKPMNYDIALLKMVGTFQFGQFVRPVCL-----PEPG-EQFNAGYICTTAGWGRL 184

  Fly   178 TETNHSANVLQTTVLTRYDNRHCRSV---LSMPITINQ-LCVGFQ--GSDTCSGDSGGPLVTKVN 236
            :|......|||...|....:..|.:|   |..|||... ||.|..  |.|.|.|||||.|:.: |
  Rat   185 SEGGSLPQVLQQVNLPILTHEECEAVMLTLRNPITGKTFLCTGSPDGGRDACQGDSGGSLMCQ-N 248

  Fly   237 YDGVWRYLQLGIVSFG------------DDKCQSPGVYTYVPNYIRWIRYVMQS 278
            ..|.|..  .|:.|:|            ..:..|||::|.:...:.||...:|:
  Rat   249 RKGAWTL--AGVTSWGLGCGRSWRNNARKKEQGSPGIFTDLRRVLPWIHEHVQT 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 79/261 (30%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 80/263 (30%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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