DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and Klk1c3

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001258244.1 Gene:Klk1c3 / 292872 RGDID:735032 Length:255 Species:Rattus norvegicus


Alignment Length:245 Identity:75/245 - (30%)
Similarity:111/245 - (45%) Gaps:21/245 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCMRPYLKVRLGEHDITRNPDCQ 107
            :|:|.|.:....|.|:...:.  :|..|||.:|...:::|||||......|.||:::::.:...:
  Rat    23 SRVVGGFKCEKNSQPWQVAVI--NEDLCGGVLIDPSWVITAAHCYSDNYHVLLGQNNLSEDVQHR 85

  Fly   108 GGSCSPPAEEFDIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNV-HEFQ 171
            ..|.|....::...|...:.|..:..:||:.||.||........::.|.|   |...|.| ....
  Rat    86 LVSQSFRHPDYKPFLMRNHTRKPKDYSNDLMLLHLSEPADITDGVKVIDL---PTKEPKVGSTCL 147

  Fly   172 AFGWGQTETN--HSANVLQTTVLTRYDNRHCRSVLSMPITINQLCVG--FQGSDTCSGDSGGPLV 232
            ..|||.|..:  ...:.||...:....|..|.......:|...||.|  ..|.|||.|||||||:
  Rat   148 VSGWGSTNPSEWEFPDDLQCVNIHLLSNEKCIKAYKEKVTDLMLCAGELEGGKDTCRGDSGGPLI 212

  Fly   233 TKVNYDGVWRYLQLGIVSFGDDKC---QSPGVYTYVPNYIRWIRYVMQSN 279
            .    |||   || ||.|:|...|   ..||:||.:..:..||:.||:.|
  Rat   213 C----DGV---LQ-GITSWGSVPCGEPNKPGIYTKLIKFTSWIKEVMKKN 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 70/235 (30%)
Klk1c3NP_001258244.1 Tryp_SPc 24..247 CDD:214473 70/235 (30%)

Return to query results.
Submit another query.