DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and Gzmk

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_058815.1 Gene:Gzmk / 29165 RGDID:68401 Length:258 Species:Rattus norvegicus


Alignment Length:271 Identity:86/271 - (31%)
Similarity:125/271 - (46%) Gaps:56/271 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCMRPYLK 92
            ||:....:|.|| ..|.|:.|:|....|.||||.:.|..:..|||.:|..:::||||||   |.:
  Rat    10 FLVAGIYMSSES-FHTEIIGGREVQPHSRPFMASIQYRGKHICGGVLIHPQWVLTAAHC---YSR 70

  Fly    93 -----VRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFDRFL-----ANDIALLKLSRNIR 147
                 |.||.|.:::|        .|..:.|:|      |.|..|.     .|||.|:||.....
  Rat    71 GHSPTVVLGAHSLSKN--------EPMKQTFEI------KEFIPFSGFKSGTNDIMLIKLRTAAE 121

  Fly   148 FNVHIQPICLILNPAAAPNVHE---FQAFGWGQTETN--HSANVLQTTVLTRYDNRHCRSVL--- 204
            .|.|:|    :|:..:...:.:   .|..|||.|:.:  .:::.||...:|....:.|.|..   
  Rat   122 LNKHVQ----LLHLRSKNYIRDGTKCQVTGWGSTKPDVLTTSDTLQEVTVTIISRKRCNSQSYYN 182

  Fly   205 -SMPITINQLCVGFQ--GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKC---QSPGVYT 263
             ...||.:.:|.|.:  ..|:|.|||||||:.|    ||:.    .:|| |..||   ..|||||
  Rat   183 HKPVITKDMICAGDRRGEKDSCKGDSGGPLICK----GVFH----ALVS-GGYKCGISNKPGVYT 238

  Fly   264 YV-PNYIRWIR 273
            .: ..|..||:
  Rat   239 LLTKKYQTWIK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 79/252 (31%)
GzmkNP_058815.1 Tryp_SPc 26..251 CDD:238113 80/254 (31%)

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