DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and F11

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_005262878.1 Gene:F11 / 2160 HGNCID:3529 Length:626 Species:Homo sapiens


Alignment Length:270 Identity:82/270 - (30%)
Similarity:124/270 - (45%) Gaps:41/270 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ANFLIPSCGVSYE--SNVATRIVRGKEAMLKSAPFMAYLYYSSEIH---CGGTIISSRYILTAAH 85
            :.:.:..|.:..|  :.:..|||.|..::....|:...|:.:|...   |||:||.:::||||||
Human   368 SGYTLRLCKMDNECTTKIKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAH 432

  Fly    86 C---------MRPYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFDRFLANDIALLK 141
            |         :|.|..: |.:.:|..:....|..        :|::..:||..:.  ..||||||
Human   433 CFYGVESPKILRVYSGI-LNQSEIKEDTSFFGVQ--------EIIIHDQYKMAES--GYDIALLK 486

  Fly   142 LSRNIRFNVHIQPICLILNPAAAP-NV--HEFQAFGWGQTETNHS-ANVLQTTVLTRYDNRHC-R 201
            |...:.:....:||||   |:... ||  .:....|||..:.... .|.||...:....|..| :
Human   487 LETTVNYTDSQRPICL---PSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQK 548

  Fly   202 SVLSMPITINQLCVGFQ--GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQ--SPGVY 262
            ......||...:|.|::  |.|.|.|||||||..|  ::.||..  :||.|:|:...|  .||||
Human   549 RYRGHKITHKMICAGYREGGKDACKGDSGGPLSCK--HNEVWHL--VGITSWGEGCAQRERPGVY 609

  Fly   263 TYVPNYIRWI 272
            |.|..|:.||
Human   610 TNVVEYVDWI 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 79/249 (32%)
F11XP_005262878.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..375 CDD:128519 0/6 (0%)
Tryp_SPc 389..619 CDD:238113 77/247 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.