DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30088 and LOC1271130

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_309876.5 Gene:LOC1271130 / 1271130 VectorBaseID:AGAMI1_011923 Length:375 Species:Anopheles gambiae


Alignment Length:294 Identity:89/294 - (30%)
Similarity:140/294 - (47%) Gaps:62/294 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSS---EIH--CGGTIISSRYILTAAHCMR-- 88
            |:||.|.   ...||:.|.:..|...|:||.|.:.:   :||  ||.:::|.|::|:||||..  
Mosquito    90 PNCGPSV---FGVRIIGGNDTELGEFPWMALLRFQARNRKIHGNCGASLVSKRFVLSAAHCFTAA 151

  Fly    89 -----PYLKVRLGEHDITR---NPDCQGGSCSPPAEEFDIVLATK---YKRFDR---------FL 133
                 ....||:.|.:...   :.||:      ..:.:|:.:..|   ..||::         ..
Mosquito   152 KSKGWKIHSVRVAEWNFMNHRGSKDCK------QVKGYDVPICRKDYDVARFEQHPEYRVNAGVH 210

  Fly   134 ANDIALLKLSRNIRFNVHIQPICL-ILNPAAA--------PNVHEFQAFGWGQTETNHSAN---- 185
            .|||.|::|:.::.:||.:.|||| :.|..|.        |.: |:.|.|||.||:...:.    
Mosquito   211 VNDIVLIELAADVEYNVFVAPICLPVSNDTAQLPFGSSDDPEI-EYTAAGWGSTESGKESTGMSY 274

  Fly   186 VLQTTVLTRYDNRHCRSVLSMP----ITINQLCV-GFQGSDTCSGDSGGPLVTKVNYDGVWRYLQ 245
            .|:...|..::...|:.:..:|    :.:..:|. |.:..|||.|||||||:..|.  ||| || 
Mosquito   275 QLKQINLRAFNKERCKKLFQVPSGVGVGLGHICAGGIRDEDTCHGDSGGPLMEAVG--GVW-YL- 335

  Fly   246 LGIVSFGDDKCQS---PGVYTYVPNYIRWIRYVM 276
            .||.|||..:|..   |||||.:.:|:.|:...|
Mosquito   336 AGITSFGWPRCGRDGVPGVYTNISHYMGWLEREM 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 83/275 (30%)
LOC1271130XP_309876.5 None

Return to query results.
Submit another query.