DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and tmprss2.6

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_002936535.2 Gene:tmprss2.6 / 100494702 XenbaseID:XB-GENE-5798774 Length:695 Species:Xenopus tropicalis


Alignment Length:305 Identity:91/305 - (29%)
Similarity:130/305 - (42%) Gaps:72/305 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SISLASTSIYICMCVCLVLQEQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSS 66
            |.|..|.::....|:               |||||:.| |.:|||.|..|...:.|:...|...:
 Frog   433 SSSCVSGNVVSLRCI---------------SCGVSHNS-VTSRIVGGTSAASGNWPWQVSLQDET 481

  Fly    67 EIHCGGTIISSRYILTAAHCM-----RPYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKY 126
            ...|||:|||.::|:|||||:     ....:|..|...:.|..|                  |..
 Frog   482 GFMCGGSIISPKWIVTAAHCVYGLYQSSAWRVFAGVLSLPRFND------------------TNS 528

  Fly   127 KRFDRFLA----------NDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEF-------QAFG 174
            ...:|.:|          |||||:||:..|.|:...||:||       ||...|       ...|
 Frog   529 YLVERIIAHPGFNLASRDNDIALMKLTEEITFDDKAQPVCL-------PNAGMFWEAGTPCWISG 586

  Fly   175 WGQTET--NHSANVLQTTVLTRYDNRHCRS--VLSMPITINQLCVGFQGS--DTCSGDSGGPLVT 233
            ||.|..  |.||: |:...:...|::.|..  |.:..||.:.:|.|:...  |||.|||||||||
 Frog   587 WGTTSEGGNVSAS-LKYAEVPLIDSKTCNESLVYNGTITSSMICAGYLNGTIDTCKGDSGGPLVT 650

  Fly   234 KVNYDGVWRYLQLGIVSFGDDKCQSPGVYTYVPNYIRWIRYVMQS 278
            :.|  |.|..:......:|..:...||||..:..::.||...|::
 Frog   651 QTN--GTWWLVGDTSWGYGCARANKPGVYGNMTTFLGWIYLQMRT 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 77/255 (30%)
tmprss2.6XP_002936535.2 LDLa 109..140 CDD:238060
LDLa <244..268 CDD:238060
LDLa 323..352 CDD:238060
SRCR_2 357..452 CDD:464747 7/33 (21%)
Tryp_SPc 460..687 CDD:238113 76/254 (30%)
Blue background indicates that the domain is not in the aligned region.

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